Hi,
I have some strange issues with bedtools using the command complementBed (bio-Linux). When running the example.
A.bed
chr1 100 200
chr1 400 500
chr1 500 800
my.genome
chr1 1000
complementBed –i A.bed –g my.genome
This should give
chr1 0 100
chr1 200 400
chr1 800 1000
instead I get
chr1 0 1000
Anyone knows how this is possible?
I have some strange issues with bedtools using the command complementBed (bio-Linux). When running the example.
A.bed
chr1 100 200
chr1 400 500
chr1 500 800
my.genome
chr1 1000
complementBed –i A.bed –g my.genome
This should give
chr1 0 100
chr1 200 400
chr1 800 1000
instead I get
chr1 0 1000
Anyone knows how this is possible?
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