Hello,

I read several postings related with CNV-seq output.

However, I have one more additional question.

The output of CNV-seq looks like this.

cnv chromosome start end size log2 p.value

CNVR_1 chrchr7 10587171 10675471 88301 1.857456 6.047393e-136

CNVR_2 chrchr7 17103711 17174351 70641 0.8851309 6.305107e-36

CNVR_3 chrchr7 22083831 22154471 70641 1.543111 5.88909e-86

CNVR_4 chrchr7 23885151 23955791 70641 0.7267016 1.549861e-25

==================================

In this case, can we say if the log2 value is positive, then that CNV is insertion and log2 value is negative, then CNV is deletion. Is it right?

Then, how can I differentiate with duplication and insertion?

Could you PLEASE help me with this?

I read several postings related with CNV-seq output.

However, I have one more additional question.

The output of CNV-seq looks like this.

cnv chromosome start end size log2 p.value

CNVR_1 chrchr7 10587171 10675471 88301 1.857456 6.047393e-136

CNVR_2 chrchr7 17103711 17174351 70641 0.8851309 6.305107e-36

CNVR_3 chrchr7 22083831 22154471 70641 1.543111 5.88909e-86

CNVR_4 chrchr7 23885151 23955791 70641 0.7267016 1.549861e-25

==================================

In this case, can we say if the log2 value is positive, then that CNV is insertion and log2 value is negative, then CNV is deletion. Is it right?

Then, how can I differentiate with duplication and insertion?

Could you PLEASE help me with this?

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