Hello,
I've tried to find differential expression with edgeR and DESeq2. These packages normalize my count data first, but they do not automatically provide normalized read counts to the end user. Any ideas how to obtain them through a series of R commands? Where could I look for this?
Thank you in advance!
I've tried to find differential expression with edgeR and DESeq2. These packages normalize my count data first, but they do not automatically provide normalized read counts to the end user. Any ideas how to obtain them through a series of R commands? Where could I look for this?
Thank you in advance!
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