Hi,
I want to explore the correlation between specific gene expression level with its CNV status among TCGA GBM data.
Scatterplot is enough for me. in my scatterplot x is gene expression value and y is CNV value(both are downloaded from TCGA level3 data). each dot in the plot represent one patient.
since I download level 3 CNV data which are segemetation data, My question is CNV value for a specific gene from different patients comparable?
I want to explore the correlation between specific gene expression level with its CNV status among TCGA GBM data.
Scatterplot is enough for me. in my scatterplot x is gene expression value and y is CNV value(both are downloaded from TCGA level3 data). each dot in the plot represent one patient.
since I download level 3 CNV data which are segemetation data, My question is CNV value for a specific gene from different patients comparable?