Hi everybody,
I am doing transcriptome data analysis. I am try to install TGICL, I export a path use the code:
export PERL5LIB=/home/cishu/Download/TGICL-2.1/lib:$PERL5LIB
After that, I met the same error whatever I run tgicl or RSEM, the error is list below:
For RSEM:
Global symbol "%Config" requires explicit package name at /usr/share/perl/5.10/Pod/Usage.pm line 567.
Global symbol "%Config" requires explicit package name at /usr/share/perl/5.10/Pod/Usage.pm line 575.
Compilation failed in require at /home/cishu/Download/rsem-1.2.12/rsem-prepare-reference line 4.
BEGIN failed--compilation aborted at /home/cishu/Download/rsem-1.2.12/rsem-prepare-reference line 4.
Error, cmd: rsem-prepare-reference --transcript-to-gene-map Transcriptref.fa.component_to_trans_map Transcriptref.fa Transcriptref.fa.TRANS died with ret: 65280 at /home/cishu/Download/trinityrnaseq_r20131110/util/RSEM_util/run_RSEM_align_n_estimate.pl line 273.
For TGICL:
Global symbol "%Config" requires explicit package name at /usr/lib/perl/5.10/lib.pm line 10.
Global symbol "%Config" requires explicit package name at /usr/lib/perl/5.10/lib.pm line 11.
Global symbol "%Config" requires explicit package name at /usr/lib/perl/5.10/lib.pm line 12.
Compilation failed in require at /home/cishu/Download/TGICL-2.1/bin/tgicl line 8.
BEGIN failed--compilation aborted at /home/cishu/Download/TGICL-2.1/bin/tgicl line 8.
Could anybody show me what's wrong? Thanks!!!
I am doing transcriptome data analysis. I am try to install TGICL, I export a path use the code:
export PERL5LIB=/home/cishu/Download/TGICL-2.1/lib:$PERL5LIB
After that, I met the same error whatever I run tgicl or RSEM, the error is list below:
For RSEM:
Global symbol "%Config" requires explicit package name at /usr/share/perl/5.10/Pod/Usage.pm line 567.
Global symbol "%Config" requires explicit package name at /usr/share/perl/5.10/Pod/Usage.pm line 575.
Compilation failed in require at /home/cishu/Download/rsem-1.2.12/rsem-prepare-reference line 4.
BEGIN failed--compilation aborted at /home/cishu/Download/rsem-1.2.12/rsem-prepare-reference line 4.
Error, cmd: rsem-prepare-reference --transcript-to-gene-map Transcriptref.fa.component_to_trans_map Transcriptref.fa Transcriptref.fa.TRANS died with ret: 65280 at /home/cishu/Download/trinityrnaseq_r20131110/util/RSEM_util/run_RSEM_align_n_estimate.pl line 273.
For TGICL:
Global symbol "%Config" requires explicit package name at /usr/lib/perl/5.10/lib.pm line 10.
Global symbol "%Config" requires explicit package name at /usr/lib/perl/5.10/lib.pm line 11.
Global symbol "%Config" requires explicit package name at /usr/lib/perl/5.10/lib.pm line 12.
Compilation failed in require at /home/cishu/Download/TGICL-2.1/bin/tgicl line 8.
BEGIN failed--compilation aborted at /home/cishu/Download/TGICL-2.1/bin/tgicl line 8.
Could anybody show me what's wrong? Thanks!!!
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