Dear all,
We want to install Trinity on our cluster, which is under x86_64-redhat-linux, Thread model: posix, gcc version 4.1.2 20080704 (Red Hat 4.1.2-50). When I tried to compile Trinity, I got errors:
Use of inherited AUTOLOAD for non-method Autom4te::XFile::msg() is deprecated at /usr/share/autoconf/Autom4te/XFile.pm line 238.
Can't locate auto/Autom4te/XFile/msg.al in @INC (@INC contains: /usr/share/autoconf /usr/lib64/perl5/site_perl/5.8.8/x86_64-linux-thread-multi /usr/lib/perl5/site_perl/5.8.8 /usr/lib/perl5/site_perl /usr/lib64/perl5/vendor_perl/5.8.8/x86_64-linux-thread-multi /usr/lib/perl5/vendor_perl/5.8.8 /usr/lib/perl5/vendor_perl /usr/lib64/perl5/5.8.8/x86_64-linux-thread-multi /usr/lib/perl5/5.8.8 .) at /usr/share/autoconf/Autom4te/XFile.pm line 238
aclocal-1.9: autom4te failed with exit status: 1
make[1]: *** [aclocal.m4] Error 1
make[1]: Leaving directory `/ocean/rhome/lichenhong/trinityrnaseq_r20140413p1/Inchworm'
make: *** [inchworm_target] Error 2
Does anyone know what was the problem and how to fix it? Or if you have compiled executables that we could use, it would be greatly appreciated. We really need the cluster to do the job in time. Thank you in advance.
We want to install Trinity on our cluster, which is under x86_64-redhat-linux, Thread model: posix, gcc version 4.1.2 20080704 (Red Hat 4.1.2-50). When I tried to compile Trinity, I got errors:
Use of inherited AUTOLOAD for non-method Autom4te::XFile::msg() is deprecated at /usr/share/autoconf/Autom4te/XFile.pm line 238.
Can't locate auto/Autom4te/XFile/msg.al in @INC (@INC contains: /usr/share/autoconf /usr/lib64/perl5/site_perl/5.8.8/x86_64-linux-thread-multi /usr/lib/perl5/site_perl/5.8.8 /usr/lib/perl5/site_perl /usr/lib64/perl5/vendor_perl/5.8.8/x86_64-linux-thread-multi /usr/lib/perl5/vendor_perl/5.8.8 /usr/lib/perl5/vendor_perl /usr/lib64/perl5/5.8.8/x86_64-linux-thread-multi /usr/lib/perl5/5.8.8 .) at /usr/share/autoconf/Autom4te/XFile.pm line 238
aclocal-1.9: autom4te failed with exit status: 1
make[1]: *** [aclocal.m4] Error 1
make[1]: Leaving directory `/ocean/rhome/lichenhong/trinityrnaseq_r20140413p1/Inchworm'
make: *** [inchworm_target] Error 2
Does anyone know what was the problem and how to fix it? Or if you have compiled executables that we could use, it would be greatly appreciated. We really need the cluster to do the job in time. Thank you in advance.
Comment