Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • fasta35 VS fasta36

    Hello,

    I need to use, for a specific job, fasta35 and not fasta36. However, the result is clearly not the same between both.

    fasta35 gives only 1 alignment: http://pastebin.com/f4NdYJCt

    while fasta36 gives 3 alignments: http://pastebin.com/ADeKJ4GC

    What I'm doing wrong with fasta35? It is probably not normal that it misses almost 2 perfect alignments on 3.

    Thank you!

  • #2
    This is a new feature in fasta36

    P.S. This question is a duplicate of a BioPerl mailing list thread where Chris gave a more detailed answer: http://lists.open-bio.org/pipermail/...st/088909.html
    Last edited by maubp; 08-08-2014, 12:07 AM. Reason: Added link

    Comment

    Latest Articles

    Collapse

    • seqadmin
      Genetic Variation in Immunogenetics and Antibody Diversity
      by seqadmin



      The field of immunogenetics explores how genetic variations influence immune responses and susceptibility to disease. In a recent SEQanswers webinar, Oscar Rodriguez, Ph.D., Postdoctoral Researcher at the University of Louisville, and Ruben Martínez Barricarte, Ph.D., Assistant Professor of Medicine at Vanderbilt University, shared recent advancements in immunogenetics. This article discusses their research on genetic variation in antibody loci, antibody production processes,...
      11-06-2024, 07:24 PM
    • seqadmin
      Choosing Between NGS and qPCR
      by seqadmin



      Next-generation sequencing (NGS) and quantitative polymerase chain reaction (qPCR) are essential techniques for investigating the genome, transcriptome, and epigenome. In many cases, choosing the appropriate technique is straightforward, but in others, it can be more challenging to determine the most effective option. A simple distinction is that smaller, more focused projects are typically better suited for qPCR, while larger, more complex datasets benefit from NGS. However,...
      10-18-2024, 07:11 AM

    ad_right_rmr

    Collapse

    News

    Collapse

    Topics Statistics Last Post
    Started by seqadmin, Today, 11:09 AM
    0 responses
    22 views
    0 likes
    Last Post seqadmin  
    Started by seqadmin, Today, 06:13 AM
    0 responses
    20 views
    0 likes
    Last Post seqadmin  
    Started by seqadmin, 11-01-2024, 06:09 AM
    0 responses
    30 views
    0 likes
    Last Post seqadmin  
    Started by seqadmin, 10-30-2024, 05:31 AM
    0 responses
    21 views
    0 likes
    Last Post seqadmin  
    Working...
    X