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  • RNAseq .wig files

    Hello all! I need to analyze some RNAseq data in .wig (wiggle) format, that I obtained from a paper, but I am unfamiliar with this format. I want to filter for a certian set of genes (ovary related) and then sort based on differential expression. Have you had experience with .wig files? Can anyone point me in a helpfull direction?

  • #2
    Information about the .wig format: https://genome.ucsc.edu/goldenPath/help/wiggle.html

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    • #3
      I found a post on BioStar that suggested using BEDOPS to convert to the more common BED file and proceed in analysis from there.

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