NOISeq_file input
Hi
I am bit new in R as well as in NOISeq. I was trying to follow the manual provided with this package but I did't understand few things. May be these are very basics but I really don't know. if any one can reply it will be a great help for me.
my queries are
1. How many input files I need for Noiseq? mycount, mylength, mygc, factors, chromosomes all are seperate files? or asingle file with seperate columns with the specific name?
2. What is the file format? .csv?
3. is the readData function directly read a .csv file or 1st I have to read it by read.csv under a vector and then use that vector in noiseq?
4. If any one have a demo file or published input data file plz. share.
Please help!
I am bit new in R as well as in NOISeq. I was trying to follow the manual provided with this package but I did't understand few things. May be these are very basics but I really don't know. if any one can reply it will be a great help for me.
my queries are
1. How many input files I need for Noiseq? mycount, mylength, mygc, factors, chromosomes all are seperate files? or asingle file with seperate columns with the specific name?
2. What is the file format? .csv?
3. is the readData function directly read a .csv file or 1st I have to read it by read.csv under a vector and then use that vector in noiseq?
4. If any one have a demo file or published input data file plz. share.
Please help!