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  • elisa*_*
    Junior Member
    • Aug 2008
    • 8
    #1

    build a new genome in CisGenome

    Dear all,
    I know many of you used ERANGE from Wold lab to analyze RNA-Seq data successfully. But I have a question about building new genome databases that are not available from Cistematic downloading website, e.g. hg19. Could anyone give me some instructions on how to do this? Thanks a lot!
    Tags: None
    • elisa*_*
      Junior Member
      • Aug 2008
      • 8
      #2
      Sorry: Cistematic, not CisGenome

      I meant to say Cistematic, which is required by ERANGE...

      Originally posted by elisa*_* View Post
      Dear all,
      I know many of you used ERANGE from Wold lab to analyze RNA-Seq data successfully. But I have a question about building new genome databases that are not available from Cistematic downloading website, e.g. hg19. Could anyone give me some instructions on how to do this? Thanks a lot!

        Comment

        • David
          Junior Member
          • Jul 2009
          • 5
          #3
          It looks like hg19 is now available on the Cistematic website, but did you figure our how to build other genomes?

            Comment

            • Karl_JV
              Junior Member
              • Dec 2009
              • 4
              #4
              I'm also trying to find a way to do this, as I'm missing TAIR9.

              Anybody found a solution?

                Comment

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