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  • #1

    build a new genome in CisGenome

    Dear all,
    I know many of you used ERANGE from Wold lab to analyze RNA-Seq data successfully. But I have a question about building new genome databases that are not available from Cistematic downloading website, e.g. hg19. Could anyone give me some instructions on how to do this? Thanks a lot!
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  • #2
    Sorry: Cistematic, not CisGenome

    I meant to say Cistematic, which is required by ERANGE...

    Originally posted by elisa*_* View Post
    Dear all,
    I know many of you used ERANGE from Wold lab to analyze RNA-Seq data successfully. But I have a question about building new genome databases that are not available from Cistematic downloading website, e.g. hg19. Could anyone give me some instructions on how to do this? Thanks a lot!

    Comment

    • #3
      It looks like hg19 is now available on the Cistematic website, but did you figure our how to build other genomes?

      Comment

      • #4
        I'm also trying to find a way to do this, as I'm missing TAIR9.

        Anybody found a solution?

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