Is there a way to get a scatter plot for two replicates of the same condition?
The below command will give us the scatter plot for Condition1 vs Condition2,
csScatter(cuffData@genes, x='Condition1', y='Condition2')
but I need a plot showing Condition1_rep1 vs Condition1_rep2.
This does not give me what I need either: csScatterMatrix(genes(cuffData), replicates =T)
Thanks,
The below command will give us the scatter plot for Condition1 vs Condition2,
csScatter(cuffData@genes, x='Condition1', y='Condition2')
but I need a plot showing Condition1_rep1 vs Condition1_rep2.
This does not give me what I need either: csScatterMatrix(genes(cuffData), replicates =T)
Thanks,