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  • etui
    Junior Member
    • Mar 2012
    • 1

    #1

    fastPhase multi allelic loci

    Hi all,

    I try to use fastPhase for Linux (v 1.4.0) but I got the error message: 'problem with input: ind 4, locus 1 perhaps more than two allelic types encountered'.
    I'm wondering if fastPhase can handle multi allelic loci? Should I split the data into populations? Or any suggestions how I can handle these data?

    Best,
    etui
    -----------------------
    The input file is:
    Code:
    9
    19
    # Strain1
    3311344424131211443
    3311344424131211443
    # Strain2
    2311344424131211443
    2111344424131211443
    # Strain3
    2311144424131211441
    2311144424131211441
    # Strain4
    4311144424131211441
    4311144424131211441
    # Strain5
    2111344424131211441
    4111344424131211441
    # Strain6
    2311344444131211441
    2111344444131211441
    # Strain7
    2111344424131211441
    2311344424131211441
    # Strain8
    2311144424131211441
    2111144424131211441
    # Strain9
    2111344424131211441
    2311344424131211441

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