Hi everyone.
I have a basic question. My bisulfite sequencing data was mapped by BSMAP, but I am not sure how to calculate the coverage/ percentage of all CpGs covered in the reference genome.
I check the README file but didn't find some hint.
Any help would be appreciated!
I have a basic question. My bisulfite sequencing data was mapped by BSMAP, but I am not sure how to calculate the coverage/ percentage of all CpGs covered in the reference genome.
I check the README file but didn't find some hint.
Any help would be appreciated!
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