Hello experts,
I am having hard time to understand a method from a metagenomic paper. The author used "median basepair coverage of reads across contig length" to measure base pair coverage of contigs. Does this mean that reads were aligned to contigs and length of contigs covered by reads were used? What does median mean here? Could anyone give me more detailed explanation on this? Any advice would be greatly appreciated.
I am having hard time to understand a method from a metagenomic paper. The author used "median basepair coverage of reads across contig length" to measure base pair coverage of contigs. Does this mean that reads were aligned to contigs and length of contigs covered by reads were used? What does median mean here? Could anyone give me more detailed explanation on this? Any advice would be greatly appreciated.
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