Unconfigured Ad

Collapse
X
Collapse
 
  • Page of 1
  • Time
  • Show
Clear All
new posts
Previous template Next
  • bzg
    Junior Member
    • Nov 2014
    • 2
    #1

    Convert SNP data to Haploview or PAML

    Chromosome

    Position RefBase SnpBase TotalHitNum MAF RefNum SnpNum W0101 W0102
    1 92 A T 668 0.002 666 2 - -
    1 112 C G 332
    1 ... ... ... ... ... ... ... ...
    It has 1537 columns，it displayed 1529 lines landraces SNP.(W0101 W0102 W0103 ...) How can I convert them into Haploview and PAML to analyze the data? I don't know how to covert them.

    Thank you very much!
    Tags: snp haploview convert
    Previous template Next

    Latest Articles

    Collapse
    • SEQadmin2
      Multiomic Liquid Biopsy: What DNA/RNA Panels Reveal That DNA Alone Can’t
      by SEQadmin2



      Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?

      Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating      ...
      Yesterday, 09:55 AM
    • SEQadmin2
      New Genomics Technologies Take Aim at Long-Standing Limits
      by SEQadmin2


      Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.

      We asked six companies the same four questions to learn about their latest products. The new technologies bring a lot to the table, including rethinking sequencing      ...
      09-28-2026, 10:25 AM
    View All

    ad_right_rmr

    Collapse

    News

    Collapse
    Topics Statistics Last Post
    Study Finds Chromatin Motion Holds Steady Until Cells Face Stress by SEQadmin2
    Started by SEQadmin2, Yesterday, 05:39 AM
    0 responses
    11 views
    0 reactions
    		 Last Post SEQadmin2
    by SEQadmin2
    Yesterday, 05:39 AM  
    Larger Datasets Reveal Additional Switches That Control Gene Expression by SEQadmin2
    Started by SEQadmin2, 10-13-2026, 09:56 AM
    0 responses
    14 views
    0 reactions
    		 Last Post SEQadmin2
    by SEQadmin2
    10-13-2026, 09:56 AM  
    Computational Tool Captures How Chromatin Folds at Scale by SEQadmin2
    Started by SEQadmin2, 10-09-2026, 11:14 AM
    0 responses
    27 views
    0 reactions
    		 Last Post SEQadmin2
    by SEQadmin2
    10-09-2026, 11:14 AM  
    Spatial Transcriptomics and Metabolite Mapping Combined on a Single Tissue Slide by SEQadmin2
    Started by SEQadmin2, 09-29-2026, 09:51 AM
    0 responses
    78 views
    0 reactions
    		 Last Post SEQadmin2
    by SEQadmin2
    09-29-2026, 09:51 AM  
    View All
    Working...