I'm trying to extract the data contained within the BigWig format using the following:
bigWigAverageOverBed CO115_R1.trimmed.fastq.gz_bismark_bt2_pe_sorted.bw CO115.bed -bedOut=out.bed out.tab
And I get the following error:
Error: unexpected symbol in "bigWigAverageOverBed CO115_R1.trimmed.fastq.gz_bismark_bt2_pe_sorted.bw"
Could someone tell me what is wrong?
bigWigAverageOverBed CO115_R1.trimmed.fastq.gz_bismark_bt2_pe_sorted.bw CO115.bed -bedOut=out.bed out.tab
And I get the following error:
Error: unexpected symbol in "bigWigAverageOverBed CO115_R1.trimmed.fastq.gz_bismark_bt2_pe_sorted.bw"
Could someone tell me what is wrong?