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  • cmccabe
    Senior Member
    • Jul 2012
    • 355

    #1

    coverage per bait calculation

    In order to calculate coverage per bait is the calculation: bait reads / (bait length * 100)? That seems a bit off when I put real #'s to it (158 / (153*100) = 0.01. Thank you .


    EDIT:

    ( read count * read length ) / length of area in question

    so if the average reads for a bait were 158 at a read length of 150 and the bait length was 153

    (158 * 150) / 153 = 155x

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