Good morning group,
I have a quick question about how mpileup and bcftools consensus work with segmented genomes. Right now I have genome with 10 segments as the reference file and when I try to use either function I only get the last segment returned.
Is there a way to get all ten back without concatenating them into one long genome?
I have a quick question about how mpileup and bcftools consensus work with segmented genomes. Right now I have genome with 10 segments as the reference file and when I try to use either function I only get the last segment returned.
Is there a way to get all ten back without concatenating them into one long genome?