Hi, everyone!
I recently want to use TE-Tracker (http://www.genoscope.cns.fr/externe/tetracker/) to identify transposon , But when I run leto.pl, somethings is wrong!
The key of error is the 219 lines of leto.pl :
`$SLC -i $dir/$file -o $OUTPUT_DIR/$file.clustered -l $x_lim -n $y_lim -m $min_pair -t 0 -r $read_length`
I think author want to use a programe named 'slclust' to deal with data, But 'slclust' that download from 'http://sourceforge.net/projects/slclust/' cannot run as this command, it only have a argument '-j';
why? and what i should do to solve this problem?
Thanks!
I recently want to use TE-Tracker (http://www.genoscope.cns.fr/externe/tetracker/) to identify transposon , But when I run leto.pl, somethings is wrong!
The key of error is the 219 lines of leto.pl :
`$SLC -i $dir/$file -o $OUTPUT_DIR/$file.clustered -l $x_lim -n $y_lim -m $min_pair -t 0 -r $read_length`
I think author want to use a programe named 'slclust' to deal with data, But 'slclust' that download from 'http://sourceforge.net/projects/slclust/' cannot run as this command, it only have a argument '-j';
why? and what i should do to solve this problem?
Thanks!
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