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ssahasnp

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  • ssahasnp

    I want to known how to use ssahasnp
    Can you help me ?
    My data :Illumina GA ,single-end reads
    purpose:detect indel
    Thank you very much

    now, I have detected indels by ssahasnp, but there is a new problem,
    how to parse the indels, the parse_indel runs unnormally.
    Its output is "ERROR main:: reads group file" . I don't known the reason.
    If you used it once, please tell me why.
    Thanks.
    Last edited by fanshu; 08-04-2010, 09:04 PM. Reason: new problem
    吃五谷杂粮,学百家之长
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