I am new to BAM file and samtools. I want to extract part of bam file by
But I got
What happened?
Code:
samtools view _SRA_RUN_AUTO_ARCHIVE_TEST_vault_EGAR00001003032_5499_1.bam "Chr5:18000-45500" > output.bam
But I got
Code:
[bam_parse_region] fail to determine the sequence name. [main_samview] region "Chr5:18000-45500" specifies an unknown reference name. Continue anyway.
What happened?
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