orf

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pingu

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Join Date: Jul 2015

Posts: 26
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#1

orf

02-22-2016, 12:38 AM

Hello!
I would like to remove the dubious ORFs in my SAM file. How can I do it? Is there an option in Ensemble Api perl that allow me to not include the dubious ORF? Or another way?
Thank you in advance
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m_two

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Join Date: Mar 2010

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#2

02-23-2016, 11:12 AM

I would review the Ensembl documentation regarding the Transcript Support Level (TSL)

ensembl.org/Help/Glossary?id=492

This may be a helpful publication

http://bib.oxfordjournals.org/content/early/2014/03/12/bib.bbu008.full
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