The latest paper about RNA-seq application is "Cloud-scale RNA-sequencing differential expression analysis with Myrna" written by Ben Langmead, etc. It uses Bowtie, R, Bioconductor. I think they are integrated with Hadoop streaming, since they are all binary executable tools. My question is how to install them on all of hadoop nodes in one step or quickly? Manually installation will be a tedious work and not acceptable when you have a big hadoop cluster, say, over 100+ nodes. I just wonder is there a solution to overcome or fix this issue.
Thanks in advance.
BTW, I don't think binary executeables installation in a shared file system like NFS is a good solution.
Thanks in advance.
BTW, I don't think binary executeables installation in a shared file system like NFS is a good solution.
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