As described here I want to use bcftools +fixref to "convert from Illumina TOP convention to fwd reference strand". However when I run:
I get the following not so informative error:
Has anybody encountered this error and/or has suggestions for a solution?
Code:
bcftools +fixref /path/to/my/infile.vcf.gz -O z -o /path/to/my/outfile.vcf.gz -- -f /path/to/my/human_g1k_v37.fasta -m top
Code:
Floating point exception (core dumped)
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