Hi all,
I got the Illumina reads from a NGS company. It is a bird genome. The quality control running by fastQC seems very weird. Too many poly kmers as attached.
Also, I have run the assembly, and the result was N50=150, no assembly at all!
I wonder if the reads of the sequencing is problematic??
Thanks in advanced!
I got the Illumina reads from a NGS company. It is a bird genome. The quality control running by fastQC seems very weird. Too many poly kmers as attached.
Also, I have run the assembly, and the result was N50=150, no assembly at all!
I wonder if the reads of the sequencing is problematic??
Thanks in advanced!
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