Hi,
I'm getting the following error when I try to take a subset from the data for analysis:
> conds
[1] "Ag" "Ti" "Qd" "Zn" "Ctrl"
> head( counts(cds) )
ag ti qd zn ctrl
1 29 14 8 15 16
2 3 2 1 3 2
3 2 1 1 5 0
4 3 2 1 5 1
5 1 1 2 1 1
6 2 1 1 2 4
>cds <- estimateSizeFactors( cds )
> cds2 <- cds[,c("Ag","Ctrl")]
Error: subscript out of bounds
Any suggestions?
Charles
I'm getting the following error when I try to take a subset from the data for analysis:
> conds
[1] "Ag" "Ti" "Qd" "Zn" "Ctrl"
> head( counts(cds) )
ag ti qd zn ctrl
1 29 14 8 15 16
2 3 2 1 3 2
3 2 1 1 5 0
4 3 2 1 5 1
5 1 1 2 1 1
6 2 1 1 2 4
>cds <- estimateSizeFactors( cds )
> cds2 <- cds[,c("Ag","Ctrl")]
Error: subscript out of bounds
Any suggestions?
Charles
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