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  • hanifk
    Member
    • Oct 2010
    • 18

    #1

    I countered this problem when running MACS.

    Under your help, I began to know I should use software,such as MACS or FindPeaks,to find peak areas.

    after using the commad,
    python setup.py install --prefix /home/taoliu/
    I think I have installed macs successfully.

    However, when I run the command ./macs14

    I got the error

    Traceback (most recent call last):
    File "./macs14", line 34, in <module>
    from MACS14.OptValidator import opt_validate
    ImportError: No module named MACS14.OptValidator

    I couldn't google this error , I don't know how to deal with it.

    Does anyone counter this problem?
    Could you give me the solution?
    Thanks very much.
  • maubp
    Peter (Biopython etc)
    • Jul 2009
    • 1544

    #2
    The import error suggests Python isn't looking in /home/taoliu/lib/python2.X/site-packages/ which is where you installed the MACS14 library. Try setting your PYTHONPATH environment variable.

    Comment

    • dawe
      Senior Member
      • Apr 2009
      • 258

      #3
      try

      Code:
      python setup.py install --user
      It should work

      d

      Comment

      • hanifk
        Member
        • Oct 2010
        • 18

        #4
        Both the two methods are useful.
        Thanks for your help.

        Comment

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