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Hi guys, I hope this is the right place for this question, I am new to the field. I am attempting to make a genome index with the gmap package. The README for gmap gives the command line:
gmap_build -d <genome> [-k <kmer size>] <fasta_files...>
I know my directory location and fasta file path is correct, however when i run it i get:
Could not create mydirectory/mygenomename.sources at /usr/bin/gmap_build line 147
When I go into the gmap_build file, line 147 is as follows:
$FP = new IO::File(">$fasta_sources") or die "Could not create $fasta_sources";
Any help would be appreciated.
gmap_build -d <genome> [-k <kmer size>] <fasta_files...>
I know my directory location and fasta file path is correct, however when i run it i get:
Could not create mydirectory/mygenomename.sources at /usr/bin/gmap_build line 147
When I go into the gmap_build file, line 147 is as follows:
$FP = new IO::File(">$fasta_sources") or die "Could not create $fasta_sources";
Any help would be appreciated.