Dear all,
I've got error message during CASAVA-1.7 installation ('make' step), but I couldn't understand what the exact problem is,,,
Here is a message,
I've got error message during CASAVA-1.7 installation ('make' step), but I couldn't understand what the exact problem is,,,
Here is a message,
wlan-n113-38:CASAVA-build joon$ make
Scanning dependencies of target CASAVA_EXPORT2SAM
[ 0%] Extracting illumina_export2sam
[ 1%] Built target CASAVA_EXPORT2SAM
Scanning dependencies of target CASAVA_SAMTOOLS
[ 1%] Building the SAM/BAM library and tools
[ 1%] Built target CASAVA_SAMTOOLS
Scanning dependencies of target CASAVA_CHART_DIRECTOR
[ 1%] Extracting the Chart director library and tools
[ 2%] Built target CASAVA_CHART_DIRECTOR
Scanning dependencies of target CASAVA_CODE_MIN
[ 2%] Extracting the CodeMin headers and examples
[ 2%] Built target CASAVA_CODE_MIN
Scanning dependencies of target CASAVA_OPT
[ 2%] Built target CASAVA_OPT
Scanning dependencies of target casava_common
[ 3%] Building CXX object c++/lib/common/CMakeFiles/casava_common.dir/Alignment.cpp.o
In file included from /Users/joon/Downloads/CASAVA_v1.7.0/src/c++/include/common/Alignment.hh:22,
from /Users/joon/Downloads/CASAVA_v1.7.0/src/c++/lib/common/Alignment.cpp:19:
/Users/joon/Downloads/CASAVA_v1.7.0/src/c++/include/common/Sequence.hh:113: error: ‘uint’ was not declared in this scope
/Users/joon/Downloads/CASAVA_v1.7.0/src/c++/include/common/Sequence.hh:113: error: template argument 1 is invalid
/Users/joon/Downloads/CASAVA_v1.7.0/src/c++/include/common/Sequence.hh:113: error: template argument 2 is invalid
make[2]: *** [c++/lib/common/CMakeFiles/casava_common.dir/Alignment.cpp.o] Error 1
make[1]: *** [c++/lib/common/CMakeFiles/casava_common.dir/all] Error 2
make: *** [all] Error 2
Scanning dependencies of target CASAVA_EXPORT2SAM
[ 0%] Extracting illumina_export2sam
[ 1%] Built target CASAVA_EXPORT2SAM
Scanning dependencies of target CASAVA_SAMTOOLS
[ 1%] Building the SAM/BAM library and tools
[ 1%] Built target CASAVA_SAMTOOLS
Scanning dependencies of target CASAVA_CHART_DIRECTOR
[ 1%] Extracting the Chart director library and tools
[ 2%] Built target CASAVA_CHART_DIRECTOR
Scanning dependencies of target CASAVA_CODE_MIN
[ 2%] Extracting the CodeMin headers and examples
[ 2%] Built target CASAVA_CODE_MIN
Scanning dependencies of target CASAVA_OPT
[ 2%] Built target CASAVA_OPT
Scanning dependencies of target casava_common
[ 3%] Building CXX object c++/lib/common/CMakeFiles/casava_common.dir/Alignment.cpp.o
In file included from /Users/joon/Downloads/CASAVA_v1.7.0/src/c++/include/common/Alignment.hh:22,
from /Users/joon/Downloads/CASAVA_v1.7.0/src/c++/lib/common/Alignment.cpp:19:
/Users/joon/Downloads/CASAVA_v1.7.0/src/c++/include/common/Sequence.hh:113: error: ‘uint’ was not declared in this scope
/Users/joon/Downloads/CASAVA_v1.7.0/src/c++/include/common/Sequence.hh:113: error: template argument 1 is invalid
/Users/joon/Downloads/CASAVA_v1.7.0/src/c++/include/common/Sequence.hh:113: error: template argument 2 is invalid
make[2]: *** [c++/lib/common/CMakeFiles/casava_common.dir/Alignment.cpp.o] Error 1
make[1]: *** [c++/lib/common/CMakeFiles/casava_common.dir/all] Error 2
make: *** [all] Error 2
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