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  • Does Cuffdiff normalize FPKMS before it does differential expression?

    Does Cuffdiff normalize FPKMs before it runs differential expression? If so what kind of normalization is performed? Can't find it in the documentation. Any ideas folks have are appreciated. Thanks -Rich

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  • seqadmin
    Exploring the Dynamics of the Tumor Microenvironment
    by seqadmin




    The complexity of cancer is clearly demonstrated in the diverse ecosystem of the tumor microenvironment (TME). The TME is made up of numerous cell types and its development begins with the changes that happen during oncogenesis. “Genomic mutations, copy number changes, epigenetic alterations, and alternative gene expression occur to varying degrees within the affected tumor cells,” explained Andrea O’Hara, Ph.D., Strategic Technical Specialist at Azenta. “As...
    07-08-2024, 03:19 PM

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