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  • k_a_r_o_l
    Member
    • Mar 2014
    • 18

    Merge multiple files based on name and different indicator

    Hello,

    How to merge multiple files in one catalog. Two files with the same name but different indicator S1/S2 should give one file.

    Example:
    600sbD_S1_R1_001.fastq
    600sbD_S2_R1_001.fastq
    550sbD_S1_R1_001.fastq
    550sbD_S2_R1_001.fastq
    537sbD_S1_R1_001.fastq
    537sbD_S2_R1_001.fastq


    Files S1 and S2 starting the same should be merged giving an output:
    600sbD.fastq
    550sbD.fastq
    537sbD.fastq

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