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  • Excel file with Blast info

    I have a large excel file, containing a large amount of annotated sequences (with the five most similar hits for each) that were obtained from root-soil samples.
    Since there are sequences of all taxonomic groups (Plant, Animal, Fungi, bacterial, protist) i would like to find some software application that could discriminate between sequences from each taxonomic group.

    How can i do this?

  • #2
    Originally posted by Chuckytah View Post
    I have a large excel file, containing a large amount of annotated sequences (with the five most similar hits for each) that were obtained from root-soil samples.
    Since there are sequences of all taxonomic groups (Plant, Animal, Fungi, bacterial, protist) i would like to find some software application that could discriminate between sequences from each taxonomic group.

    How can i do this?
    I have found MG-RAST website and i have upload my contigs.fasta ... do you know if this website solve my problem? of taxonomic separation/filtering my sequences?

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