species 1 : 10M 35bp reads
species 2 : 12M 35bp reads
de nove assembly:
species 1: 4235 contigs
species 2: 5863 contigs
and we known the coverage of every site on each contig.
How can we use coverage information for gene expression analysis of one species or comparative analysis between 2 species?
species 2 : 12M 35bp reads
de nove assembly:
species 1: 4235 contigs
species 2: 5863 contigs
and we known the coverage of every site on each contig.
How can we use coverage information for gene expression analysis of one species or comparative analysis between 2 species?
Comment