Hello,
I tried usiing tophat and got a message that I need to use a bowtie2 alignment instead of bowtie, so, I downloaded the zip package for bowtie2. I was able to get bowtie2-build installed on my computer, but I am unable to get 'bowtie2' working. Whenever I try to it gives me the following message:
Error: Expected bowtie2 to be in same directory with bowtie2-align...
I'm not sure what to do from here. Any help is greatly appreciated!
Best,
Anzdro
I tried usiing tophat and got a message that I need to use a bowtie2 alignment instead of bowtie, so, I downloaded the zip package for bowtie2. I was able to get bowtie2-build installed on my computer, but I am unable to get 'bowtie2' working. Whenever I try to it gives me the following message:
Error: Expected bowtie2 to be in same directory with bowtie2-align...
I'm not sure what to do from here. Any help is greatly appreciated!
Best,
Anzdro
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