Hi, all!
We recently ran Chip-seq and RNA-seq and got decent amount of data.
When we the raw sequences by running in NCBI blast, all the sequences from Chip-seq were aligned to E.coli genomes. However, only a few sequences were mapped on E.coli genomes.
FYI, our samples were from mouse cells.
Has anyone experienced this?
We recently ran Chip-seq and RNA-seq and got decent amount of data.
When we the raw sequences by running in NCBI blast, all the sequences from Chip-seq were aligned to E.coli genomes. However, only a few sequences were mapped on E.coli genomes.
FYI, our samples were from mouse cells.
Has anyone experienced this?
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