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If you want to know which sequences (transcripts/unigenes/protein) belong to which biological function/gene ontology term with Blast2GO you can use the "Combined Graph Function" and then export the graph as .txt file (from the side-panel). This gives you a spreadsheet with a list of all sequence IDs for each GO terms (one GO per row) for all GO levels and categories. This means direct and indirect functional annotations for MF, CC and BP.
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The sequencing world is rapidly changing due to declining costs, enhanced accuracies, and the advent of newer, cutting-edge instruments. Equally important to these developments are improvements in sequencing analysis, a process that converts vast amounts of raw data into a comprehensible and meaningful form. This complex task requires expertise and the right analysis tools. In this article, we highlight the progress and innovation in sequencing analysis by reviewing several of the...05-06-2024, 07:48 AM -
The field of epigenetics has traditionally concentrated more on DNA and how changes like methylation and phosphorylation of histones impact gene expression and regulation. However, our increased understanding of RNA modifications and their importance in cellular processes has led to a rise in epitranscriptomics research. “Epitranscriptomics brings together the concepts of epigenetics and gene expression,” explained Adrien Leger, PhD, Principal Research Scientist...04-22-2024, 07:01 AM
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