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  • tophat error -- image not found

    Hi All,

    Can someone help for this --

    While running TopHat 2.1.1 OS X I repeatedly ran into this error:

    Searching for junctions via segment mapping
    Coverage-search algorithm is turned on, making this step very slow
    Please try running TopHat again with the option (--no-coverage-search) if this step takes too much time or memory.
    [FAILED]
    Error: segment-based junction search failed with err =-5

    Any idea what caused that and how to overcome?

    Thanks in advance,

    Wing

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