Dear colleagues,
I have a very simple question to ask but I am struggling with it...
I have a restriction enzyme of 6 nucleotides and i want to find ALL sites within the human genome (hg19 for instance) where the restriction enzyme matches the sequence.
I was trying to use blast but it seems that I am using a too short sequence so it never returns a list.
Any recommendations on how to compute that?
thanks a lot in advance
I have a very simple question to ask but I am struggling with it...
I have a restriction enzyme of 6 nucleotides and i want to find ALL sites within the human genome (hg19 for instance) where the restriction enzyme matches the sequence.
I was trying to use blast but it seems that I am using a too short sequence so it never returns a list.
Any recommendations on how to compute that?
thanks a lot in advance
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