Hi
I am trying to convert .sam file to a .bam file using the following script:-
samtools view -bT Ref_HighCov_B07.fa Reads.sam > Reads.bam
And the error I get is this....
[sam_header_read2] 116 sequences loaded.
[sam_read1] reference '' is recognized as '*'.
Parse error at line 1: missing colon in auxiliary data
Kindly help
Regards
Ankur
I am trying to convert .sam file to a .bam file using the following script:-
samtools view -bT Ref_HighCov_B07.fa Reads.sam > Reads.bam
And the error I get is this....
[sam_header_read2] 116 sequences loaded.
[sam_read1] reference '' is recognized as '*'.
Parse error at line 1: missing colon in auxiliary data
Kindly help
Regards
Ankur