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Geoseq: a tool for dissecting deep-sequencing datasets.
BMC Bioinformatics. 2010;11:506
Authors: Gurtowski J, Cancio A, Shah H, Levovitz C, George A, Homann R, Sachidanandam R
Datasets generated on deep-sequencing platforms have been deposited in various public repositories such as the Gene Expression Omnibus (GEO), Sequence Read Archive (SRA) hosted by the NCBI, or the DNA Data Bank of Japan (ddbj). Despite being rich data sources, they have not been used much due to the difficulty in locating and analyzing datasets of interest.
PMID: 20939882 [PubMed - indexed for MEDLINE]
More...
Geoseq: a tool for dissecting deep-sequencing datasets.
BMC Bioinformatics. 2010;11:506
Authors: Gurtowski J, Cancio A, Shah H, Levovitz C, George A, Homann R, Sachidanandam R
Datasets generated on deep-sequencing platforms have been deposited in various public repositories such as the Gene Expression Omnibus (GEO), Sequence Read Archive (SRA) hosted by the NCBI, or the DNA Data Bank of Japan (ddbj). Despite being rich data sources, they have not been used much due to the difficulty in locating and analyzing datasets of interest.
PMID: 20939882 [PubMed - indexed for MEDLINE]
More...