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alyamahmoud

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Last Activity: 03-13-2017, 11:17 PM

Joined: 11-18-2013

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Last Activity

50 bp paired end reads vs. 100 bp single end reads (Topic in the Bioinformatics forum)

01-15-2014, 09:05 PM

bowtie2 indices from separate chromosome fasta files (Topic in the RNA Sequencing forum)

01-16-2014, 07:12 AM

BWA-GATK pipeline showing weird results upon visulisation (Topic in the Genomic Resequencing forum)

03-27-2014, 04:45 AM

Comparing location of reads mapping to reference genome (Topic in the RNA Sequencing forum)

02-06-2014, 07:10 AM

Merging accepted_hits and unmapped reads from tophat o/p (Topic in the RNA Sequencing forum)

11-19-2013, 02:30 AM

mpileup error (Topic in the Bioinformatics forum)

05-05-2014, 01:35 AM

no differentially expressed genes using cuffdiff nor HTSeq/DESeq2-single reads (Topic in the RNA Sequencing forum)

12-01-2014, 09:27 AM

non-typical p values distribution running DESeq (Topic in the Bioinformatics forum)

07-01-2014, 06:03 AM

samstat versus tophat overall alignment rate % (Topic in the RNA Sequencing forum)

12-26-2013, 08:11 AM

simulated 50 bp SE gives higher alignment rate compared to 100 bp PE (Topic in the Bioinformatics forum)

01-16-2014, 04:00 PM

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