Dear All
I have RNASeq reads of different length (50,100) mapped to the same reference genome. I need to determine if they map to the same regions or different. Which tools do I use ?
I used tophat for the alignment with -g 1 option.
Thanks a lot
I have RNASeq reads of different length (50,100) mapped to the same reference genome. I need to determine if they map to the same regions or different. Which tools do I use ?
I used tophat for the alignment with -g 1 option.
Thanks a lot
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