Hi everyone!
I've been analyzing some illumina whole exome sequencing data these days. yesterday I used GATK(version 2.0) UnifiedGenotyper to call...
26 results in 0.0023 seconds.
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Error while running GATK UnifiedGenotyper
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Need advice on whole exome sequence analysis..
I am entirely new to NextGen Sequencing data analysis and have been working on a project for a week. We have whole human exome 100bp paired end data from... -
Error when running Dindel realignment stage
Hi all,
I'm running Dindel for calling small indels from whole-exome sequencing data.
I have finished pervious samples successfully.... -
Manipulating normal samples for CNV analysis
Dear all,
I have exome sequence data for about 100 patients. I found some tools like VarScan, ExomeCNV etc for CNV analysis. But they all... -
exome sequencing - big coverage differences
Hi,
I would like to know if any of you had experience with Tru-Seq exome sequencing and if you see that there is a lot of variation in... -
exome copy number and LOH
Hi folks,
Can anyone recommend a good tool for exome copy number analysis on Illumina data?
Ideally, but not necessarily, it would... -
Sequencing beginner looking for review articles
Hi there,
I am new to sequencing. I have absolutely no idea what I get from the sequencing and how I proceed further. I know it sounds crazy. I... -
Time required for exome assembley
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CNV variation effects on exome sequencing?
Hello, all; first time poster and exome sequencer here. We're attempting to find differential base pairs in paired tumor/normal samples from a 2.1M Exome... -
Pooling the samples
We're looking for a variation causing a rare disease.
This variation should be a monogenic, dominant, autosomal mutation.
... -
beginner comparing exomes
Hi, starting on my very first NGS project...
I have 2 sequenced exomes in FASTQ format and I want to do a couple basic things:
1....
