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Basic Coverage Calculation Questions
For the sequencing technologies ABI 3730, 454, Illumina, and PacBio, what would the number of reads be to ensure 99.995% coverage of the human genome... -
For Sale SOLiD
For Sale:
(1) ABI 5500xl SOLiD sequencer
(1) Applied Biosystems SOLiD 4 Analyzer
(1) Applied Biosystems... -
REMI vs OEM for Service Contracts
Hello,
Has anyone had direct (or indirect) experience with REMI as a service provider for sequencing instrumentation? Was the experience... -
Mutations detection
Hi all,
I know that maybe there's many threads that talked about a pieces of what I'm going to ask, but I'm really in a none issue situation... -
Home-made ABi SOLiD Total RNA-Seq ??
This kit is too expensive. Anyone with knowledge, information, or a friend who might know a guy who once made a home-made version of this kit, please... -
Unusual use of .ab1 files from an ABI capillary sequencer -- help
Hi,
I want to extract the "trace data" from the ab1 file, without calling bases. the traces from my experiment will look like... -
Bead preparation for "GS Junior" with ABI EZ Bead Dystem
Hello!
If we would have and Roche "GS Junior" and also the Applied Biosystems (Life Technologies) "EZ Bead Sytem" (SOLiD... -
SOLiD Accuracy Enhancement Tool (SAET) multicore and ref genome size questions
Just dl SAET to try
one of the options jumped out at me
refLength – expected length of the assembled sequence, e.g.,... -
ABI SOLiD data filtering and conversion to base-space
I have previously been using Solexa for small RNA sequencing but am trying out SOLiD. I just received the data back for my first SOLiD smallRNA sequencing... -
BFAST - Alignment for ABI or Illumina sequencing - with qualities
I wanted to let the community know about a new release of BFAST that now supports reads with quality scores.
http://genome.ucla.edu/bf... -
ABI SOLiD $10k Grant Program: 60GB Mappable Sequencing Data
This just hit my inbox. AB has launched a grant program for SOLiD runs. They are giving away a significant number of reads to the best research project... -
Invitrogen acquires single molecule startup Visigen!
As part of their 3rd quarter 2008 earnings announcement, Invitrogen noted that they have purchased early stage single molecule sequencing... -
SOCS: Efficient mapping of Applied Biosystems SOLiD sequence data to a ref genome...
Bioinformatics. 2008 Oct 7. [Epub ahead of print]
Efficient mapping of Applied Biosystems SOLiD sequence data to a reference genome for functional... -
ABI Announces SOLiD v3.0. Weekend warriors rejoice.
Just finished up day 1 at the SOLiD users group meeting. Was a good meeting with both a look at AB R&D, and quite a few good customer presentations.... -
Metrics for usability of a SOLiD dataset
The following derives largely from an email I sent to some "fellow travelers" before I heard of this web site.
Consider 3 SOLiD...
