Hi guys!
I'm sequencing and assembling a de novo invertebrate genome of about 0,8Gb. I want to make a lane run of Illumina nextera mate-pairs,...
7 results in 0.0030 seconds.
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Sophie's choice: Random mate-pairs or gel selection in Illumina?
Last edited by Marcela Uliano; 01-08-2015, 07:35 AM. -
Extracting unitigs from Allpaths-LG
Hello Seq-ers,
I want to extract the unitigs that allpaths constructs in its assembly process for use as high confidence sequence to correct... -
Sequencing strategey for large fish genomes and AllPaths assembly
We are starting a number of large (1.5-4 Gb) fish de novo genome sequencing projects. The AllPaths-LG assembler seems to be producing the best genomes... -
Miseq v2 PE library length for Allpaths-LG
Hello,
I'd like to use ALLPATHS-LG for de novo assembling of a fungal genome
(~20 Mbp). I will use Miseq data for the assembling.... -
Haploidify in ALLPATHS-LG
Hi,
Could someone please explain to me what the HAPLOIDIFY function does in ALLPATHS-LG? I have done two assemblies with ALLPATHS-LG - one with... -
Contig coverage from ALLPATHS-LG
Hi,
I have recently done my first de novo assembly with ALLPATHS-LG. I was wondering if it was possible to determine the coverage for each of the... -
AllPaths-LG
I am trying to force AllPaths-LG to use my paired-end data with "standard" insert size of about 300bp.
As per documentation it...
