Hi,
I'm want to annotate a big, complex eukaryotic genome from non-model using GeneMark 4.69 gene prediction.
I want to train...
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training GeneMark for gene prediction
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MG-RAST - Alignment parameters of their process statistics?
After analyzing a metagenomic sample with MG-RAST, you go typically to the Metagenome Overview page to see how it performed.
At sections...
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Cuffmerge loses gene_id annotation
Dear forum readers,
I'm following the tophat2/cufflinks/cuffmerge/cuffdiff/cummeRbund workflow for my human RNA-seq data analysis. I'm...
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Comparisons between two annotations
Hello,
I have a couple questions related to multiple annotations of a single genome. Is there a way to compare two separate annotations...
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[Announcement] Testers needed for new peak annotation tool
Hi,
I am developing a new c++ based open-source tool (peak-tool) to annotate peaks from a bed file using gencode annotation database. ...Last edited by amitra; 05-07-2015, 01:46 PM.
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How do you determine which a gene annotation is correct?
Using the program Artemis, I have to get the annotation of one specific gene. I then have to do a blast search on other databases (Ecocyc, KEGG, etc.)...
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Post-Doctoral opportunity - Genomic analysis
Post-Doctoral Associate position now open in bioinformatics and genome analysis
Oklahoma Medical Research Foundation, Arthritis & Clinical...
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Annotation with refseq of transcripts
Hi,
I would like to annotate or add description to my transcript for which I only have refseq number (accession number). I cannot find...
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Annovar
How can I add additional annotations like the gwas db or omim db to the output of summarize_annovar.pl either as an option for that script or after the...
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Get BIOBASE Genome Trax in Avadis NGS
We have have joined forces with BIOBASE to bring you one of BIOBASE's latest
biological databases - BIOBASE Genome Trax - as integrated annotations,...