NGS Epigenomics Data Analysis Workshop
Exploring DNA Methylation and Chromatin Landscapes with Next-Generation Sequencing Data
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ecSeq Bioinformatics started a topic In-Person Workshop - NGS Epigenomics Data Analysis (November 3-5 in Munich) - BS-Seq, ChIP-Seq, ATAC-Seq, ...in EpigeneticsIn-Person Workshop - NGS Epigenomics Data Analysis (November 3-5 in Munich) - BS-Seq, ChIP-Seq, ATAC-Seq, ...
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In-Person Workshop - NGS Epigenomics Data Analysis (November 3-5 in Munich) - BS-Seq, ChIP-Seq, ATAC-Seq, ...
NGS Epigenomics Data Analysis Workshop
Exploring DNA Methylation and Chromatin Landscapes with Next-Generation Sequencing Data
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Hands-On NGS Epigenomics Data Analysis Workshop (November 3-5 in Munich, Germany)
NGS Epigenomics Workshop
Exploring DNA Methylation and Chromatin Landscapes with Next-Generation Sequencing Data
When? November... -
In-Person NGS Epigenomics Workshop (November 3-5 in Munich, Germany)
Exploring DNA Methylation and Chromatin Landscapes with Next-Generation Sequencing Data
When? November 3-5, 2025
Where? Munich,... -
PBMC samples chromatin extraction - low concentration
Hello,
I have been trying to extract chromatin from an immune system population, but the DNA concentration levels that I've been getting... -
ChIP-Seq library prep; trailing, primer dimer help?
Hi,
I've prepared ChIP-Seq libraries using NEBNext Multiplex Oligos for Illumina (Set 1, NEB #E7335) along with the NEBNext Ultra II DNA Library... -
My NGS data. What to use: galaxy, R or ?
Hi all,
Really hope for your help, guys.
I finally got my ChIP-Seq data back. Hoping it is not too bad. You can check for... -
ChIPSeq sequencing depth for histone modifications
Hi,
We would like to sequence mouse Histone modification (H3K4me3,H3K4me1,H3K27me3,H3K27ac) chip-seq samples using illumina Hiseq2500. Previously... -
Script to make sequences equal length
Hi!
I would like to perform a motif analysis with my ChIP-Seq data on meme-suite.
The program requires me to put in sequences of equal length.... -
ChIP-seq cross correlation
Dear all,
sorry to bother you but I still do not get why there is a phantom peak for the read length in cross correlation analysis of NGS... -
ChIP-seq peaks in centromeric regions
Hello!
I am struggling with non specific peaks called by macs2 around centromeric regions in my ChIP-seq data. A lot of reads map around... -
chip-seq data analysis with galaxy
Hi all! I am very new to this field, so I apologize in advance for my ignorance. I have done several chip-seq experiments on a protein from A.thaliana... -
Algebraic operations with genomic occupancy data
Hi all,
What is a proper software to calculate the average between several genomic coverage signals (e.g. several ChIP-seq replicates, with...Last edited by __sequence; 11-24-2017, 07:37 PM. -
Using ChIP-seq NarrowPeaks peak calls as machine-learning predictors
I wish to train a classificatory computational model for the predicting the occurrence (or not) of certain genomic features using NarrowPeaks peak calls... -
Conversion of ChIP-Seq signal data into bed format
I have converted ChIP-Seq signal data into bed format. In the fifth column of the output file, there are some values in decimal fraction. Now I kinda...
