Hello,
I have created a topGO object using a list of DMRs from BS-seq analysis and wondered if anyone knew of a good way to add whether...
5 results in 0.0021 seconds.
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adding extra factors to topGO object
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Differentially Methylated Regions (DMRs) finding in time series experiment
Hi,
I am dealing with Whole Genome Bisulfite Data (WGBS), form a time series experiment (4 stages), and I am wondering i f I could do Differentially... -
Which software/algorithm do you use to find DMR in chipseq methylation data?
I'm fairly new in the CHIP-seq field and would like to have recommendation on the best way to find DMRs.
Which software/platform/algorithm... -
differentially methylated sites with methylKit
I want to generate an outfile containing or C site (CG, CHG or CHH) that are differentially methylated (DM) using the R package methylKit
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xfliwz started a topic swDMR: a sliding window approach to identify DMR based on bisulfite sequencingin EpigeneticsswDMR: a sliding window approach to identify DMR based on bisulfite sequencing
swDMR is a sliding window approach, which is used to identify differentially methylated regions (DMRs) from bisulfite sequencing dataset at single base...Last edited by xfliwz; 09-11-2012, 01:02 AM.
