Hi everyone,
I am analyzing intrahost viral quasispecies evolution of Hepatitis C virus by Illumina deep-sequencing from lonigtudinal clinical...
5 results in 0.0029 seconds.
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dN/dS ratio (ka/ks) calculation for viral quasispecies
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dN/dS calculation on mpileup data
Hello, everyone. I am doing a viral re-sequencing project, mapped reads in mpileup format. Is anyone aware of any programs that can do dN/dS calculation... -
dn/ds genome-wide
Hi all,
I have assembled a de novo transcriptome for my organism of interest (in this case, the eastern oyster). The genome of a related species... -
Understanding PAML output according to site/branch/branch-site models used
Hi all seqanswers readers,
I want to know if someone can help me to understand exactly all kind of PAML outputs.
In fact globally... -
codeml fix_omega and omega
HI,
I am using codeml in my analysis. The use of "fix_omega and omega" parameters of codeml.ctl file is not clear to me. It would be...
