Code:
>ES981358
8 results in 0.0055 seconds.
-
inconsistent CAP3 assembly and alignment
I have 5 related EST sequences and I want to assemble contigs. I am using the sequence assembly program CAP3. Here is my data:
... -
On using BLASTX to find the protein coding frame
Hello All,
I'm using BLASTX to find the correct frame that contains the protein coding region fin the cDNA of a eukaryotic species. Because... -
Automating intron discovery in EST-derived gene models
So, yes, I have a large number of gene models that are derived from EST data. That is, the coding sequence is correct but any introns will be missing.... -
IDEG6 - Normalization question - Identification Differentially Expressed Genes
Hello friends,
I'm using IDEG6 for Identification Differentially Expressed Genes but they normalize my values and I don't know how they... -
EST alignments without genome
Hi all,
Wondering if anyone could offer me some suggestions on how to approach an analysis. Currently, I am examining a transcriptome... -
TGICL fasta vs refdb
Hi,
I'm using tgicl for clustering EST,
I don't want to it perform all-vs-all, I want to it perform my EST against TIGR gene index...Last edited by Daniel Fernandez; 11-30-2011, 09:31 PM. -
TGICL installation
Hi everyone
This is my problem, I've tried to install TGICL for clustering EST, from
http://sourceforge.net/projects/tgicl/
... -
feed EST data to cufflinks
Hi, all
Is there any way to use the EST data to help cufflinks assemble the transcripts?
